Bulk Contribution Entry Issues on Upgraded Site

I upgraded the Baykeeper 4.2 site to 4.3 today. The upgrade took over 1 hour especially in the "timestamp" updates.

As some history, Baykeeper has added some contribution types and renamed some of them and has been using Civi since 3.2. For instance default "Donation" is actually "Cash" in their instance.

Anyway, the bulk contribution entry isn't working.

1. Bulk 'contribution type' just is blank. (see attached). Typing in the name of a valid contribution type and submitting a contribution results in no error the contribution showing up in the contact "contributions" tab but no actual contributions are listed. See attached.

2. We tested 4.2 for comparison. While contribution type and newly created custom contribution data DOES work in 4.2, older (prior to 4.2) custom contribution data fields do not work. The contribution is submitted, but the custom data is blank. I have dB output showing that while new contribution custom data is INSERT, old contribution custom data is improperly UPDATE. (see log file attached). Are these issues related?